Write Updated XML

Reads and processes an XML file containing NULISAseq data. This function reads the input XML file and returns the XML document with updated info (v1.3.0) from loadNULISAseq (e.g. AQ and QC info).

writeUpdatedXML(input_XML, rawReadCutoff = 200, data = NULL)

Arguments

input_XML

Path to the input XML file to be processed

rawReadCutoff

The raw read value cutoff to apply to individual sample/target combinations

data

output of loadNULISAseq (optional)

Value

XML document object containing the NULISAseq data

Examples

# writeUpdatedXML("path/to/input.xml")